IMHO.
An advantage of the scarf joint is that the epoxy that squeezes out of the joint is only a thin line, not the 2" or 4" or whatever width tape you use on the butt joint. So yes you still use the wax paper but you don't have a couple dozen of square inches of epoxy touching it (giving more opportunity for sticking).
Another advantage of the scarf joint is that, if you align it correctly, you cannot squeeze out the epoxy between the scarfed edges. With the butt joint, too much pressure will starve the glass tape of resin. You may have trouble believing that you cannot starve a properly aligned scarf joint. BUt if you think about it in the macro sense - think about gluing up 1/4" scarfed pieces and keep the two pieces of plywood (the scarf joint) an inch apart. Butter up both sides and add weights. As you press down, the weight will stop when it rests on the 1/4" thickness of the unscarfed part of the plywood. In this scenario, you cannot squeeze glue out of the joint without compressing the plywood -which is difficult. If you keep this picture in mind, then move the scarfed joints together until they're 1 mm apart. You still can't press all the glue out. If you're still with me, you have a joint that's 2 or 3" wide, well epoxied and a lot stronger that what you have when you join the sides of your pirogue to the bottom. That's probably not the best explanation but if I lost you let me know and i'll try again.
To me the time spent feathering in the edges of the tape around a butt joint is more than the time required to make a scarf.
guess i'm just a diehard fan of scarfs