You will need to epoxy saturate the bottom so some of the epoxy gets into the wood , this helps bind everything together. After it cures ( usually overnight) Lightly sand it to get rid of the whiskers , small fibers of wood that fill up with epoxy and stand up , they will snag and put runs in the glass if they aren't lightly sanded down. Then lay the glass on it and epoxy it. Usually one more coat will fill the weave and then the epoxy and graphite. You could try the epoxy and graphite as the 2 coat because it take three light coats to do the job , anyway that is how many I use.
Make sure you want the graphite on there because after is is on there it is a real S.O.B. to take off and creates quite a mess with the sander and the person doing the sanding.
BEFORE ANYTHING........ After you sand the bottom to bare wood , try a test area with the saturation and see if it lays on there and does not make any doughnuts ( circles with holes in the middle where the epoxy did not stick to the wood ). The reason I am asking that is when ever someone has anything oily around the wood and it gets on it the epoxy will not stick to it. That includes sprays or just oil off the hands from handling a can of WD-40 and stuff like it , will do it.
What has me worried is you used an oil base paint and the questions is , how much of the oil was saturated into the wood , if any.
This is a special concern when doing the glassing and the wood is going to show , by doing the bottom with the graphite no one will see them and the glass would be over them with more epoxy on it. A few small ones should not be a problem , if there are any at all.
I may be putting the cart in front of the horse but it is something to think about and could happen. With any luck it won't.